BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026G11LP1|AL428614
(855 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1559 1668 0.0
>3x_Contig1559
Length = 10415
Score = 1668 bits (835), Expect = 0.0
Identities = 845/855 (98%)
Strand = Plus / Plus
Query: 1 atccagagaaatgttgcaacaaaacaagatcatgaaggttatcaagaagaacatcgtcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5388 atccagagaaatgttgcaacaaaacaagatcatgaaggttatcaagaagaacatcgtcaa 5447
Query: 61 gaagatgatcgaaactttcaacgaaatcgcggaagactctgaacaattcgacaagttcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5448 gaagatgatcgaaactttcaacgaaatcgcggaagactctgaacaattcgacaagttcta 5507
Query: 121 caccgccttctcgaagaacatcaagttaggtatccacgaagatactcaaaacagagctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5508 caccgccttctcgaagaacatcaagttaggtatccacgaagatactcaaaacagagctgc 5567
Query: 181 tttggctaagttgttgagatacaactccaccaagtctgttgacgaattgacttctttgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5568 tttggctaagttgttgagatacaactccaccaagtctgttgacgaattgacttctttgtc 5627
Query: 241 cgattacgtcaccagaatgccagaacaccaaaagaacatctacttcatcaccggtgaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5628 cgattacgtcaccagaatgccagaacaccaaaagaacatctacttcatcaccggtgaatc 5687
Query: 301 tattaaggccgttgaaaaatctccattcttggrtgccttgaaggccaagaacttcgaagt 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 5688 tattaaggccgttgaaaaatctccattcttggatgccttgaaggccaagaacttcgaagt 5747
Query: 361 cttgttccttgttgacccaatcgatgaatacgccttctctcaattgaaggrattcgaagg 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5748 cttgttccttgttgacccaatcgatgaatacgccttctctcaattgaaggaattcgaagg 5807
Query: 421 tragcrattggttgacattaccaaggatttcgaattggragaaactgaagaagaaaaggr 480
| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5808 taagcaattggttgacattaccaaggatttcgaattggaagaaactgaagaagaaaagga 5867
Query: 481 acaaagagaaaaggaagttaaggrattcgaacctttgaccaccgctttgaaagaratctt 540
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 5868 acaaagagaaaaggaagttaaggaattcgaacctttgaccaccgctttgaaagaaatctt 5927
Query: 541 gggtgaccaagtcgaaaaggtggttgtctcccacaagttgttggatgctccagccgctat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5928 gggtgaccaagtcgaaaaggtggttgtctcccacaagttgttggatgctccagccgctat 5987
Query: 601 cagaaccggtcaattcggttggtccgctaacatggaaagaatcatgaaggctcaagcctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5988 cagaaccggtcaattcggttggtccgctaacatggaaagaatcatgaaggctcaagcctt 6047
Query: 661 gagagactctagtatgtcttcctacatggccwmcaagaaaatcttcgaaatctctccaaa 720
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 6048 gagagactctagtatgtcttcctacatggcctccaagaaaatcttcgaaatctctccaaa 6107
Query: 721 gtctccaatcattagagaattgaagaacaaggtcgaagaaggtggtgctcaagacaagac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6108 gtctccaatcattagagaattgaagaacaaggtcgaagaaggtggtgctcaagacaagac 6167
Query: 781 tgtcaaggacttgactaacttgttgttcgaaactgcattgttgacttccggtttctcctt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6168 tgtcaaggacttgactaacttgttgttcgaaactgcattgttgacttccggtttctcctt 6227
Query: 841 ggaagaaccatcttc 855
|||||||||||||||
Sbjct: 6228 ggaagaaccatcttc 6242
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6650
Number of Sequences: 1807
Number of extensions: 6650
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 855
length of database: 10,358,551
effective HSP length: 16
effective length of query: 839
effective length of database: 10,329,639
effective search space: 8666567121
effective search space used: 8666567121
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)